- V. planifolia
- Lineage
- Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Asparagales; Orchidaceae; Vanilloideae; Vanilleae; Vanilla.
- Tissue
- Leaf, Stem, Root, Seed, Hair cell, placental laminae, light mesocarp, dark mesocarp
- Technique/Data Source
- NCBI SRA database
- The assembly coding sequences classified in the different categories
| BLAST Cutoff | Tentative Annotation | V. planifolia Seq# |
|---|---|---|
| Identity ≥ 80% AND E_Value ≤ 1e-40 AND Coverage ≥ 80% | Homologue to Accession/Definition of Protein | 14369 |
| (E_Value ≤ 1e-40 AND (Identity < 80% OR Coverage < 80%)) OR 1e-40 < E_Value ≤ 1e-30 | Similar to Accession/Definition of Protein | 13790 |
| 1e-30 < E_Value ≤ 1e-5 | Weak similar to Accession/Definition of Protein | 669 |
| Total | 28828 | |
- Reference
- Rao, X. et al. (2014) A deep transcriptomic analysis of pod development in the vanilla orchid (Vanilla planifolia). BMC genomics 15, 964, doi:10.1186/1471-2164-15-964.