- P. equestris
- Lineage
- Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Liliopsida; Asparagales; Orchidaceae; Epidendroideae; higher Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
- Tissue
- Flower bud
- Technique/Data Source
- Sequences were downloaded from OrchidBase and reassembled by ABRC bioinformatics team
- The assembly coding sequences classified in the different categories
| BLAST Cutoff | Tentative Annotation | P. equestris Seq# |
|---|---|---|
| Identity ≥ 80% AND E_Value ≤ 1e-40 AND Coverage ≥ 80% | Homologue to Accession/Definition of Protein | 6008 |
| (E_Value ≤ 1e-40 AND (Identity < 80% OR Coverage < 80%)) OR 1e-40 < E_Value ≤ 1e-30 | Similar to Accession/Definition of Protein | 24882 |
| 1e-30 < E_Value ≤ 1e-5 | Weak similar to Accession/Definition of Protein | 4516 |
| Total | 35406 | |
- Reference
- Tsai, W. C. et al. (2013) OrchidBase 2.0: comprehensive collection of Orchidaceae floral transcriptomes. Plant & cell physiology 54, e7, doi:10.1093/pcp/pcs187.