- O. italica
- Lineage
- Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Asparagales; Orchidaceae; Orchidoideae; Orchideae; Orchidinae; Orchis; Orchis italic
- Tissue
- Pooled florets from a single inflorescence
- Technique/Data Source
- NCBI SRA database
- The assembly coding sequences classified in the different categories
| BLAST Cutoff | Tentative Annotation | O. italica Seq# |
|---|---|---|
| Identity ≥ 80% AND E_Value ≤ 1e-40 AND Coverage ≥ 80% | Homologue to Accession/Definition of Protein | 5696 |
| (E_Value ≤ 1e-40 AND (Identity < 80% OR Coverage < 80%)) OR 1e-40 < E_Value ≤ 1e-30 | Similar to Accession/Definition of Protein | 18274 |
| 1e-30 < E_Value ≤ 1e-5 | Weak similar to Accession/Definition of Protein | 811 |
| Total | 24781 | |
- Reference
- De Paolo, S., Salvemini, M., Gaudio, L. & Aceto, S. (2014) De novo transcriptome assembly from inflorescence of Orchis italica: analysis of coding and non-coding transcripts. PloS one 9, e102155, doi:10.1371/journal.pone.0102155